PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043230.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 600aa MW: 66783.2 Da PI: 6.8788

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043230.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	430	476	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu043230.1 430 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 476 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MGGILWNDED KATVAVVFGT KAFDYLMSSS VLAECSLMAM GSDENLQNKL SDLVEHPNAA 60 SFSWNYAIFW QLSRSKSGDL VLGWGDGCCR EPREGEESEA TRILNFRLED ETQQRMRKRV 120 LQKLHTRFGG TEEDNYAFGL DKVTDTEIFF LASMYFSFPR GEGGPGKCFG SGKHVWLSDA 180 LKSSFDYCVR SFLAKSAGMQ TIVLVPTDVG VVELGSVRPV PESLELVQMI RSSFSSHSSL 240 IRTNQAVAQP VGIDRKDGDG PNSNLVIGSR PGVVPKIFGQ DMNSGSVQFR EKLASRKLDD 300 RPCDVYGNGN RLPFAHARSG FHCSTWTQLG NVKPGNPVEI YSPQTAAKNQ YELVSRAKEE 360 FQLSSFQHQK PGQMQIDFTG ATPRPITSGP LNVDSHRLDA EVSCNEDLLD ERRPRKRGRK 420 PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA YITELQKKLK 480 DIELEKEKLG NISQEAKISE TKPNSERQDQ PPSIDIRSVH DEVIVRVSCP LDAHPVSWVY 540 QAIKDAEATI VESKIATGND HVFHTFVVKS HGLERITEEK LIEAFSRESN PRQASKSVG*

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MGGILWNDED KATVAVVFGT KAFDYLMSSS VLAECSLMAM GSDENLQNKL SDLVEHPNAA  60
SFSWNYAIFW QLSRSKSGDL VLGWGDGCCR EPREGEESEA TRILNFRLED ETQQRMRKRV  120
LQKLHTRFGG TEEDNYAFGL DKVTDTEIFF LASMYFSFPR GEGGPGKCFG SGKHVWLSDA  180
LKSSFDYCVR SFLAKSAGMQ TIVLVPTDVG VVELGSVRPV PESLELVQMI RSSFSSHSSL  240
IRTNQAVAQP VGIDRKDGDG PNSNLVIGSR PGVVPKIFGQ DMNSGSVQFR EKLASRKLDD  300
RPCDVYGNGN RLPFAHARSG FHCSTWTQLG NVKPGNPVEI YSPQTAAKNQ YELVSRAKEE  360
FQLSSFQHQK PGQMQIDFTG ATPRPITSGP LNVDSHRLDA EVSCNEDLLD ERRPRKRGRK  420
PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA YITELQKKLK  480
DIELEKEKLG NISQEAKISE TKPNSERQDQ PPSIDIRSVH DEVIVRVSCP LDAHPVSWVY  540
QAIKDAEATI VESKIATGND HVFHTFVVKS HGLERITEEK LIEAFSRESN PRQASKSVG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	412	420	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein