PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043709.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 235aa    MW: 25695.2 Da    PI: 8.2009
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043709.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.11.3e-353188259
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
                 +++ l+cprCdstntkfCyynny+ sqPr+fCkaC+r+WtkGG+lrnvP Gggr++++
  Oeu043709.1 31 QSEPLECPRCDSTNTKFCYYNNYNKSQPRHFCKACKRHWTKGGTLRNVPAGGGRKNKR 88
                 56889**********************************************9976655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MGVSTWNQSL PQSDGAEQPK PPPPTRRSHQ QSEPLECPRC DSTNTKFCYY NNYNKSQPRH  60
FCKACKRHWT KGGTLRNVPA GGGRKNKRLK TSNGSSTTIG GGAATINPTT SSILPFGAFN  120
RNNGSAPKNQ NPGFQFSSLN TFDIDSSSSL IPNSFQSLNA YEFAGNRLDT VEESTVTTVN  180
PSTSSTVIEF PWGGPSTESA MNVPNYYWNN WNDIDLLTSS DLINLSWDDT DIKP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-30Dof family protein