PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043714.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 208aa    MW: 23222.9 Da    PI: 6.6323
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043714.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC42.61.3e-1383120135
        NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkaded 35 
                  ql++fw++q   +e+++dfkn++lPlarikki+kaded
  Oeu043714.1  83 QLQAFWANQmqeVEHTNDFKNQSLPLARIKKIMKADED 120
                  89******97777999*********************9 PP
2NF-YC41.43.1e-1311915367101
        NF-YC  67 eenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                  e+nkrrtl+k+diaaa++rtd+fdflvdi+prdel
  Oeu043714.1 119 EDNKRRTLQKNDIAAAISRTDVFDFLVDIIPRDEL 153
                  689******************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MNQSDHILQQ QHQNLQQQQP VVGVVPGSGQ MTYANPYQAA HVVATGTPAV AISSPSTYPA  60
SQLAYHHQPQ QFNSQQLQQS QQQLQAFWAN QMQEVEHTND FKNQSLPLAR IKKIMKADED  120
NKRRTLQKND IAAAISRTDV FDFLVDIIPR DELREEGLAG MIMGKPVDQS ALFTGQHPQQ  180
PPPYMSWPPS QGQLSQPQER QSDTTKG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.12e-32NF-YC family protein