PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043814.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

YABBY

Protein Properties

Length: 117aa MW: 13007.2 Da PI: 8.6886

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043814.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	90.3	5.1e-28	13	79	2	68
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslk 68 +++s seq+Cyv+CnfC+t+lavsvP tslfk+vtvrCG+Ct+llsvn++ +a + hl++s+ Oeu043814.1 13 HHVSPSEQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGYCTNLLSVNMRSLLVPTANQLHLGQSFF 79 78999*****************************************999998888888888888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MSSSSSAFAP DHHHVSPSEQ LCYVHCNFCD TVLAVSVPCT SLFKTVTVRC GYCTNLLSVN 60 MRSLLVPTAN QLHLGQSFFS PQNFMVYIIR VPKYSCINIF FAKKGGFELW KTYKLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	2e-30	YABBY family protein