PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu043860.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 100aa MW: 11278 Da PI: 10.6488

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu043860.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.1	5.8e-29	33	87	2	56
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqak 56 + kkdrhski T++g+RdRR+Rls+++a +fFdLq++LGfdk++kt++ Ll+++k Oeu043860.1 33 TDKKDRHSKIITAQGPRDRRMRLSISTACKFFDLQEMLGFDKPGKTLDLLLTNSK 87 679**************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence
MVLATIDFPV SNKTKLTTYQ EFDRFNGNPR KQTDKKDRHS KIITAQGPRD RRMRLSISTA 60 CKFFDLQEML GFDKPGKTLD LLLTNSKIWW GGVGWGGVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	6e-22	TCP family protein