PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu043887.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 345aa    MW: 38305.7 Da    PI: 6.3192
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu043887.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.39e-18239273135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu043887.1 239 CLHCSTDKTPQWRTGPMGPKTLCNACGVRYKSGRL 273
                  99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MENPDFFQGN YAKNGDHFII EDPLDFPKDD VMLTEDTFDS SVGASTNSSA ATVVDASCNS  60
SFSGSSTTTE PHFPGGIGGC QSFADEQFSN TELCMQHDDL AELEWLSNFV EESFSSEEFQ  120
RLHLIQGMKA RTDEPYETRL YQFHPETTTT TIDTTPMLRP QMPVPAKARS KRSRSAPGNW  180
TSRLLALSPT PLSSVPAMPA SSESEIAVNV GKKPMKAMAK KKEGSNTAIT ENDSEGRKCL  240
HCSTDKTPQW RTGPMGPKTL CNACGVRYKS GRLVPEYRPA ASPTFVLTKH SNSHRKVLEL  300
RRQKELRRAH QHQQYPHQNI TFDVSDGDDY LIHQHIGPDY GQLI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-72GATA family protein