PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044426.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 420aa    MW: 46960.6 Da    PI: 6.0626
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044426.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS428.26.6e-131494191374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL++cA+avs++d+  a+ l++ l++++s +g+p+qRl ay++e+L+arl+ s+s +y++l+++e +   sse +++++++++++P++kf++  a
  Oeu044426.1  49 LQQLLISCAKAVSEDDMLTADVLMNILEKRVSVSGEPLQRLSAYMLEGLRARLLASGSIIYRKLKCNEPT---SSELMSYMHVLYQICPYYKFAYTSA 143
                  579******************************************************************9...99*********************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N  I ea+++e+r+HiiDf+i qG QW++L+qaLa+Rp+gpp  R+Tgv++++s   +   l+ +g+rLak+Ae++gvpfefn  +  +  +++le+L
  Oeu044426.1 144 NVVIGEAMKNEKRIHIIDFQIAQGSQWVSLIQALACRPGGPPYTRVTGVDDSQSAyaRGGGLQLVGQRLAKVAEACGVPFEFNG-AGMSGCEVQLENL 240
                  ***************************************************999899999************************.899999******* PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  +v++gEalaVn+ ++lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n+++F+ rf+e+l+yy+a+f+s++a  pr++++ri+ E+++++r
  Oeu044426.1 241 QVQHGEALAVNFPYMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFCETLDYYTAMFESIDAARPRDDRQRISAEEHCVAR 338
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +ivn++aceg+er+erhe ++kWr rl++aGF+pvpl++++ + ++ +l+ ++s+ y + ee+g+l+l Wk+r+Lv+ SaWr
  Oeu044426.1 339 DIVNIIACEGTERVERHELFGKWRLRLTMAGFSPVPLNSSVGNAIQDMLNDYSSN-YCLREENGALYLRWKNRALVTSSAWR 419
                  *****************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MQALMVLRYE LLGPESDIDD SCSFNGVVSQ PSSLTRYDKI LETAHNMDLQ QLLISCAKAV  60
SEDDMLTADV LMNILEKRVS VSGEPLQRLS AYMLEGLRAR LLASGSIIYR KLKCNEPTSS  120
ELMSYMHVLY QICPYYKFAY TSANVVIGEA MKNEKRIHII DFQIAQGSQW VSLIQALACR  180
PGGPPYTRVT GVDDSQSAYA RGGGLQLVGQ RLAKVAEACG VPFEFNGAGM SGCEVQLENL  240
QVQHGEALAV NFPYMLHHMP DESVSTANHR DRLLRLVKSL SPKVVTLVEQ ESNTNTAPFF  300
PRFCETLDYY TAMFESIDAA RPRDDRQRIS AEEHCVARDI VNIIACEGTE RVERHELFGK  360
WRLRLTMAGF SPVPLNSSVG NAIQDMLNDY SSNYCLREEN GALYLRWKNR ALVTSSAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein