PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044525.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family B3
Protein Properties Length: 197aa    MW: 22116.2 Da    PI: 6.7147
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044525.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B367.12.5e-21108194182
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                  f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d +g +W++++iyr++++r++lt+GW+ F ++++L +gD v+F
  Oeu044525.1 108 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyKEQ-RPSQELIAKDIHGIEWKFRHIYRGQPRRHLLTTGWSIFISQKNLVSGDAVLF 194
                  99****************************86333.45679*********************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MELWHACAGP LTTLPKKGNL VVYFPQGHLE QVASRDMSNF DLPPQIFCRV LDIQLLANRE  60
NDDVYAQLTV LPTTELIGAK LDDKEIERIG VHEDGDGVTT AKSTSHMFCK TLTASDTSTH  120
GGFSVPRRAA EDCFPPLDYK EQRPSQELIA KDIHGIEWKF RHIYRGQPRR HLLTTGWSIF  180
ISQKNLVSGD AVLFLR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.11e-102ARF family protein