PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044570.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 704aa    MW: 77423.6 Da    PI: 5.1322
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044570.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS290.73.9e-893427013373
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +l++++Ae + +g+++ aq++Larl++   p  +p+qR a+yf+eAL+  l+ s ++ + +++  +  + +   ++ a+k+fsevsPi++f ++taNq
  Oeu044570.1 342 DLVYKAAELILAGNFSYAQEILARLNHVLIPIVKPFQRSAFYFKEALQLALLMSNPNASPTMRNPT--PIDGMFKMGAYKVFSEVSPIIQFMNFTANQ 437
                  57899************************************************8888887764443..3469************************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl..eleeLrv 196
                  a+lea++ +e++HiiDfdi+ G+QW +++q+L + ++g +sl+iTg++sp++++  e++ ++e+L++fA+ lgv+fe  v+ +++++     l+++r 
  Oeu044570.1 438 ALLEALDYAEHIHIIDFDIGCGAQWSSFMQQLPTNNRGLASLKITGFASPSTHNPAEISLMHENLTQFANDLGVNFELVVVNVDSFDPNssPLSSFRE 535
                  ********************************************************************************977766544226778888 PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgre 293
                  ++ Ea+aVn+ +  +  +   +sl      +L ++k+lsPk++v  ++ +++ + +F  ++l+ l+yy al+ds+ +a+    s+ ++k+E++l+++ 
  Oeu044570.1 536 SESEAIAVNFPIWSFASH---LSLLF---PFLCFIKKLSPKILVSLDRGCERVDLPFSCHILNMLQYYEALLDSIdAAN--IPSDSASKIEKFLFQPG 625
                  88********99665554...56655...8*********************************************5555..56778899********* PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  i++ v  +       h  +  Wr+ l++aGF p+++s++a++qa++l++++ + g++ve+++ slvl+W++ +L+s+S W
  Oeu044570.1 626 IESTVLGRLHY----HAPMPPWRSLLSSAGFLPASISNFAETQAEYLVKRTRVTGFHVEKRQTSLVLYWQQWQLMSISTW 701
                  *****988877....***************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MIGEQYNNNL LPNGGASSVF VSPASLLEVN CKKSANFTGN EPISVLDTRS PSPSTSTSTL  60
SSFNQPTATA ASVGVGGEGN EGLMANLKPG DNSGMELSHG LAEKFNLGQE DWEKLLSESA  120
VQDQVLLQWI AGNSEDSPVI CGFEALATGG SAISPVGNVF SSPNPSALGP FGSEFSLSEN  180
SNVEKIGNFV TSLPLSVNFE QQFGTLEQKA QIFNQQVQKA SNLNILSLNP SFYGTQQDYH  240
PHFQRQSKRC NLGNMNLNLG SENASSTFVD LGHEMLLPSQ SQFPQMEQPP VGYCQQPNFI  300
PLSQLQEKPL LVPKQETNGG NVEKMVAHHH RQQQPQQQIA YDLVYKAAEL ILAGNFSYAQ  360
EILARLNHVL IPIVKPFQRS AFYFKEALQL ALLMSNPNAS PTMRNPTPID GMFKMGAYKV  420
FSEVSPIIQF MNFTANQALL EALDYAEHIH IIDFDIGCGA QWSSFMQQLP TNNRGLASLK  480
ITGFASPSTH NPAEISLMHE NLTQFANDLG VNFELVVVNV DSFDPNSSPL SSFRESESEA  540
IAVNFPIWSF ASHLSLLFPF LCFIKKLSPK ILVSLDRGCE RVDLPFSCHI LNMLQYYEAL  600
LDSIDAANIP SDSASKIEKF LFQPGIESTV LGRLHYHAPM PPWRSLLSSA GFLPASISNF  660
AETQAEYLVK RTRVTGFHVE KRQTSLVLYW QQWQLMSIST WIC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.19e-89GRAS family protein