PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu044880.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 331aa MW: 37110.2 Da PI: 9.5785

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu044880.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	96.1	7e-30	53	157	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsssg........ 88 g+kdrhsk++T +g+RdRR+Rls+++a++++ Lqd+LG+ ++sk ++WLl + k++i++l+ ++ ++ +++ ++++ sss s+ s++ Oeu044880.1 53 GGKDRHSKVCTVKGLRDRRIRLSVPTAIQLYNLQDRLGLSQPSKVVDWLLDATKHEIDKLPPLPMPTGMNFshfpNDHHLSSSLSHFSNTnqayakds 150 78*************************************************************66666333344555555555543333323332222 PP TCP 89 ......k 89 Oeu044880.1 151 glnhvfF 157 3322220 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MIMNSRSEKD FRAKQEGDAY NSSKFSEIPP SSSRRWSSSL KNPRIVRVSR NFGGKDRHSK 60 VCTVKGLRDR RIRLSVPTAI QLYNLQDRLG LSQPSKVVDW LLDATKHEID KLPPLPMPTG 120 MNFSHFPNDH HLSSSLSHFS NTNQAYAKDS GLNHVFFSRK EELGIKNVSN HVERVHQNQE 180 NQEGFGGYVA QNFFPQGNYQ SPFPTPLLNN PYFNWDPNPS LSLSQFGAGG HSYPNQTEES 240 HNNISAPSSS QLYFYPSGTA IPSLNFPPLI PSFMTTSMEN ELRQSNYFQQ QNSLMPTLHL 300 IGSPMISFGS NANQKTVQLP EKGNNESSSS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	1e-44	TCP family protein