PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu044928.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 229aa    MW: 24271.9 Da    PI: 6.2844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu044928.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.61.6e-06200223629
                  HHHHHHHHHHHHHHHHHHHCTSCC CS
          HLH   6 nerErrRRdriNsafeeLrellPk 29 
                  +++Er RR ri +++ +L+el+P+
  Oeu044928.1 200 SIAERVRRTRISDRIRKLQELVPN 223
                  689********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MQPVGGGGSS ELSRSGGGGL ARYRSAPATW LEALLESDEE PSEVVLDPPL LSSSKPPTVP  60
PHSATVTGTT TSRLDTDLSL LETLSGGPSH GLSNFLRQSS SPAEFLSQIN SDGYISSFGI  120
PDYTSPSSVN VSSGKWAFDA EDADKSTKLS SSSSQQRGEK GGLLRSGLSG SFDAETEKLL  180
EDSVMCRTRA KRGCATHPRS IAERVRRTRI SDRIRKLQEL VPNMDKVN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.16e-26bHLH family protein