PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045408.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 321aa MW: 34377.5 Da PI: 8.5316

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045408.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.6	1.3e-39	39	131	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....k 89 +k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pa++++tgt++++a+++ + s ++s+s+ s++ + Oeu045408.1 39 QPKRNSTKDRHTKVDGRGRRIRMPATCAARVFQLTKELGHKSDGETVEWLLQQAEPAVIAATGTGTIPANFSsLNLSARNSGSTMSAPlhlrN 131 6899*****************************************************************999655555555554444344431 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MQSPNFPLEL LKKRNFEEAS SSSILPTNSG NLEAEKKPQP KRNSTKDRHT KVDGRGRRIR 60 MPATCAARVF QLTKELGHKS DGETVEWLLQ QAEPAVIAAT GTGTIPANFS SLNLSARNSG 120 STMSAPLHLR NNYFNQTLRS SIEDSQRRVL FSGVGLSPPE NINPLNFSNG NINVNSMLQA 180 KQEPVVQTHM FQSSTGSIPA SQDQIPATTF LMMTNHKSQV MSGDSLWTFP GIGNSSTMCR 240 GSSMPSSGLH FMNFPTPLAL LPGQQLGMGN GGCSGGGTVM DGHLSWLSTL NGFSLGGSEA 300 QATSHDAEGH DLHITTSNHL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	4e-54	TCP family protein