PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045851.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 394aa MW: 43543 Da PI: 7.0714

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045851.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.2e-05	37	65	4	32
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClle 32 +C++++++ + C dC+ lC C + Oeu045851.1 37 LICDKCHSQAAVVRCMDCELSLCSGCDWN 65 68************************855 PP
2	CCT	62.9	9.9e-22	337	380	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ Oeu045851.1 337 RDKAKMRYNEKKKTRMFGKQIRYASRKARADTRKRVKGRFVKAG 380 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MATAVVYCKT DLARLCLQCD GHVHSENSFS QRHPRSLICD KCHSQAAVVR CMDCELSLCS 60 GCDWNGNGCL GVAGHRRLKL NFYCGCPSPA EFCKIWSLVL DEPKSSCFDA SWSPIPTTNG 120 NSMTNSLEAR NDPGSGGMVA NRLNELASYV KFGQWATPSQ VVQSNIPSYV SSSCNTGQKP 180 QFCNDQMPFG FPNRIKDLGL HDSVDMDDMA LSFDSGYEMF ENLQNQPSYH YDDGGMSSLV 240 TEKNFSVTES NSTYIEIGFG LTNLVQPINN VTAKSMLMHQ SCNSNNIGLG FPSGRLPSTM 300 SPAGNVADFQ DCELSPVFLA GDAPWESNFE GSCQQARDKA KMRYNEKKKT RMFGKQIRYA 360 SRKARADTRK RVKGRFVKAG EAYDYDPLII REF*

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MATAVVYCKT DLARLCLQCD GHVHSENSFS QRHPRSLICD KCHSQAAVVR CMDCELSLCS  60
GCDWNGNGCL GVAGHRRLKL NFYCGCPSPA EFCKIWSLVL DEPKSSCFDA SWSPIPTTNG  120
NSMTNSLEAR NDPGSGGMVA NRLNELASYV KFGQWATPSQ VVQSNIPSYV SSSCNTGQKP  180
QFCNDQMPFG FPNRIKDLGL HDSVDMDDMA LSFDSGYEMF ENLQNQPSYH YDDGGMSSLV  240
TEKNFSVTES NSTYIEIGFG LTNLVQPINN VTAKSMLMHQ SCNSNNIGLG FPSGRLPSTM  300
SPAGNVADFQ DCELSPVFLA GDAPWESNFE GSCQQARDKA KMRYNEKKKT RMFGKQIRYA  360
SRKARADTRK RVKGRFVKAG EAYDYDPLII REF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	2e-78	CO-like family protein