PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu045995.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 565aa    MW: 62921.7 Da    PI: 4.7369
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu045995.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS435.15.1e-1331965643374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL+ecA a++ g++e+a+ +++ l++ +s +gdp +R+aay++eAL arla s+++lykal+++e +   ss +l+a+++++e +P+++f++ +aN 
  Oeu045995.1 196 RLLFECAAAIQGGKFEEASLMINDLRQKVSIQGDPSERIAAYMVEALTARLATSGKGLYKALKCKEPP---SSLRLSAMQVLFEGCPCFRFGFTAANG 290
                  79*****************************************************************9...99************************* PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aIlea++ e+rvHiiDfdi+qG Q+ +Llq++a+ p++ p++R+Tgv++pes+  s   l+ +g+rL+++Ae l+v+fef++ va +++ +++++L++
  Oeu045995.1 291 AILEAFKDEKRVHIIDFDINQGSQYYTLLQTMAKIPGSRPHVRLTGVDDPESVqrSVGGLRVIGRRLEQLAEDLQVSFEFQA-VAAQTALVSPSMLNC 387
                  ***************************************************9988999************************.7999*********** PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  +pgEal+Vn+++qlh+++desvs+ + rd++L++vk+l+Pk+v+vveq++++n+++Fl rf+ea +yysa+f sl+a+lpr+se+r++vE+++l+r+i
  Oeu045995.1 388 QPGEALIVNFAFQLHHMPDESVSTVNLRDQLLRMVKGLNPKLVTVVEQDVNTNTTPFLPRFAEAYNYYSAVFKSLDATLPRNSEDRMNVEKHCLARDI 485
                  ************************************************************************************************** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  vn+vaceg+er+er e ++kWr+r+++aGF++ p+s+++  +++ ++++++++ ++++ee g+l +gW+d+ L+++SaWr
  Oeu045995.1 486 VNIVACEGEERIERYEVAGKWRARMSMAGFTSCPISQNVSIEIRKVIKEYSDR-FKLKEETGALHFGWEDKILIVTSAWR 564
                  ***************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    
MSLVRPAALF GNHELISLRD DNDSSGLSTS IFNSDNHELI YTTESCSSES YNPKYFLDSP  60
SEELVHTSDS DVLRNAFYPS HSSSFVASGH DTYNFNYESE YLSGPSLDAI DYDEDKMRLK  120
VQELERALLD DNAFNGDDDD AFATDRSMEI DGEWSGQTLN GVLHESPKES SSSDSILSSI  180
SSSKELSIAT LLTPKRLLFE CAAAIQGGKF EEASLMINDL RQKVSIQGDP SERIAAYMVE  240
ALTARLATSG KGLYKALKCK EPPSSLRLSA MQVLFEGCPC FRFGFTAANG AILEAFKDEK  300
RVHIIDFDIN QGSQYYTLLQ TMAKIPGSRP HVRLTGVDDP ESVQRSVGGL RVIGRRLEQL  360
AEDLQVSFEF QAVAAQTALV SPSMLNCQPG EALIVNFAFQ LHHMPDESVS TVNLRDQLLR  420
MVKGLNPKLV TVVEQDVNTN TTPFLPRFAE AYNYYSAVFK SLDATLPRNS EDRMNVEKHC  480
LARDIVNIVA CEGEERIERY EVAGKWRARM SMAGFTSCPI SQNVSIEIRK VIKEYSDRFK  540
LKEETGALHF GWEDKILIVT SAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein