PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046033.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 520aa MW: 58939 Da PI: 6.8957

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046033.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.3	4.7e-14	8	57	36	87
trihelix 36 kkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +km+e gfer++k+Ckek+enl k++k++keg+ + ++ +t+++fdqlea Oeu046033.1 8 RKMAELGFERTAKKCKEKFENLYKYHKRTKEGRAAK--QDGKTYRFFDQLEA 57 68******************************95..67778*****85 PP
2	trihelix	105	5.5e-33	335	419	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev+aLi++r++++ +++++ k+plWee+s++m + g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+ Oeu046033.1 335 RWPKAEVQALIDLRTSLDLKYQENGPKGPLWEEISAAMGRLGYNRNAKRCKEKWENINKYFKKVKESNKNR-PEDSKTCPYFHQLN 419 8******************************************************************98.99********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MNKSRFIRKM AELGFERTAK KCKEKFENLY KYHKRTKEGR AAKQDGKTYR FFDQLEALES 60 NTPQPVLEEP QPLSMVAPPP IPKPVNVAQN AAAAAVQGAN NSTSSLFQQL QPPPLQPALP 120 PPTMNTTSTT TTTYPPQSHN FHPSNMAFSN SSSSTSSDED IQRRSGRKRK WKDFFERLMK 180 NAIDKQVELQ KKFLETLEKR ERDRMAREEA WRVQEMARLN REHDLLVQER SIAAAKDAAV 240 IQFLQKITEQ QNLQIPISNA NPPQMPMSMP MPMQVQPPEN TPPPVPPPQP AAPPQQIPAP 300 APTVAQVVVT QTKVLDTPRT DNNGGENFMP ASSSRWPKAE VQALIDLRTS LDLKYQENGP 360 KGPLWEEISA AMGRLGYNRN AKRCKEKWEN INKYFKKVKE SNKNRPEDSK TCPYFHQLNA 420 LYRERAKTDS SSNPGFLMKP DQNPIMPIMA RPEQQWPLPQ GQHQDSALDD RGSENVDEND 480 DHEDEDDDED EDEGANYEIV TNKQQSSTPN TNTNTNTIE*

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MNKSRFIRKM AELGFERTAK KCKEKFENLY KYHKRTKEGR AAKQDGKTYR FFDQLEALES  60
NTPQPVLEEP QPLSMVAPPP IPKPVNVAQN AAAAAVQGAN NSTSSLFQQL QPPPLQPALP  120
PPTMNTTSTT TTTYPPQSHN FHPSNMAFSN SSSSTSSDED IQRRSGRKRK WKDFFERLMK  180
NAIDKQVELQ KKFLETLEKR ERDRMAREEA WRVQEMARLN REHDLLVQER SIAAAKDAAV  240
IQFLQKITEQ QNLQIPISNA NPPQMPMSMP MPMQVQPPEN TPPPVPPPQP AAPPQQIPAP  300
APTVAQVVVT QTKVLDTPRT DNNGGENFMP ASSSRWPKAE VQALIDLRTS LDLKYQENGP  360
KGPLWEEISA AMGRLGYNRN AKRCKEKWEN INKYFKKVKE SNKNRPEDSK TCPYFHQLNA  420
LYRERAKTDS SSNPGFLMKP DQNPIMPIMA RPEQQWPLPQ GQHQDSALDD RGSENVDEND  480
DHEDEDDDED EDEGANYEIV TNKQQSSTPN TNTNTNTIE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-62	Trihelix family protein