PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046137.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 312aa    MW: 34599.8 Da    PI: 6.7764
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046137.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.4e-19229263135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++C++ kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu046137.1 229 CTHCHVQKTPQWRAGPLGPKTLCNACGVRYKSGRL 263
                  *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MDYCSIESKA LKSSFLSRME MKTNSQVLLN DDGWCLAGIN GGPGDDFPVE ELLNLDFQPE  60
EPFFQEEEVS VSKLSSQHSH SNSLSHFSGA AEFDNLLAGE LSVPVEESEN LEWLSQFVDD  120
SISGHSFLCP AGSLREKTRE MLDQETKAPW FPVTVPGKTR SKRSRTNGRA WPLTSPSVSI  180
TSSSFGHSAD PVQDTDRDSF SSVENPPTKK RKIKPAAETC SFSQTVRRCT HCHVQKTPQW  240
RAGPLGPKTL CNACGVRYKS GRLLPEYRPA CSPTFSRDIH SNSHRKVLQM RQKKEISDLV  300
EPGLTPMVTS F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-53GATA family protein