PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046309.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 218aa MW: 24402.7 Da PI: 8.6527

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046309.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.4	6.5e-07	66	85	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C k+F+r nL+ H+ Oeu046309.1 66 FSCHICQKTFNRYNNLQMHM 85 89*****************9 PP
2	zf-C2H2	10.8	0.0016	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ Oeu046309.1 150 FACRKCGKCLAVKGDWRTHEKNC 172 78*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MDLKNPNPGH EEEEDAINVS LHIGPPNCTN VSLDSSDQCS KAANLAAATQ YWIPTPEQIL 60 VGFTHFSCHI CQKTFNRYNN LQMHMWGHGS EYRRGPESLK GAKPRAMLGI PCYCCEEGCK 120 NNINTPRAKP LKDFRTLQTH YKRKHGMKQF ACRKCGKCLA VKGDWRTHEK NCGRRWLCVC 180 GSDFKHKRSL KDHIASFGSG HEPAASSSSS FDGIDVY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	1e-102	C2H2 family protein