PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046465.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 144aa    MW: 16563.1 Da    PI: 9.57
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046465.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.84.6e-066890123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++Cgk+F  k + ++H +++
  Oeu046465.1 68 FVCTKCGKPFAVKGDWRTHEKNC 90
                 89*****************9987 PP
2zf-C2H210.70.001797113521
                  TTTEEESSHHHHHHHHH CS
      zf-C2H2   5 dCgksFsrksnLkrHir 21 
                  +Cg  F++k +Lk Hi+
  Oeu046465.1  97 ICGSDFKHKRSLKDHIK 113
                  8**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT QPTGMLRLPC YCCASGCKHN IDHPTARPLK DFRILQTHYK  60
RKHGTKSFVC TKCGKPFAVK GDWRTHEKNC GKIWYCICGS DFKHKRSLKD HIKAFGFGHQ  120
TLGIRIDFEE DDENLLETFH LKV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.14e-81C2H2 family protein