PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046540.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 233aa    MW: 25757.6 Da    PI: 8.9687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046540.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-124490354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  +h+e+ErrRR+riN  +++L+++lP+       K +Ka+ L +Av+ +++L
  Oeu046540.1 44 NSHKEAERRRRKRINAHIATLKTILPNT-----IKTDKASLLAEAVRRVREL 90
                 58*************************8.....69***********999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MYSIPSLYEL GNCSDFLQTE TSNLENQNLS PRSMAEAKAV AANNSHKEAE RRRRKRINAH  60
IATLKTILPN TIKTDKASLL AEAVRRVREL KKTTAELAAI EEEGEKDTDH DMSNTKSKFI  120
FPSETDELKV TYCDDNSGLI KANICCDDRP EIILELIQAL KSVKGKVMKA EMATVGGRIK  180
SILWVQILGS IGNEDSLGTL RRALKVVMDK STLLAGSGHA LPGNKRPRCY HF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-37bHLH family protein