PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046708.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-other

Protein Properties

Length: 1004aa MW: 111793 Da PI: 8.9315

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046708.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.7	1.9e-08	64	120	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ ++++F+ + ++s++e +e+++ ++t +qV+ +F N+R + +k Oeu046708.2 64 KKPRDLLNPKAIKYMQSVFALKDTISKKETREISSLFRITATQVRDFFNNKRSRVRK 120 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MELPKEENQL AVATSSATSY HDLLHAQLGL FKSQIEHLKN IVTTQCELTG VNPLSQEMVI 60 FLRKKPRDLL NPKAIKYMQS VFALKDTISK KETREISSLF RITATQVRDF FNNKRSRVRK 120 FVTLSREKAN RSTACNEIHD EVLSTSNPNI PNEPVPIHSV VPMNIEEGPS SSVQDEVLSH 180 VDNSDRYFVE NIFSLMRKEE LFSGQVKLME WILQIQNPSV LNWFLTNGGV MILATWLSQA 240 ASEEQTSVLN VVLKVLCHLP LMKALPVHMS AILQGVNKLR FYRKSDISNR ARMLLARWSK 300 AFAKSQALKK RNGMNLAADA QDEMLLKQSI EEVLGDEARD SKVNDFVSYL RLLECFLNTL 360 NLQGNALIPF ENQHNLRKVK PSQPLKMITA STDDSNKRRG VLSILTEAQK RRKVQMVEQP 420 VQRTGIRSSP QVAKSVPATQ SRPLSADDIQ KAKIRAQFIQ NKYGKSITSP DESQKKIISS 480 QASPSVPNAF VRPKLEEQNK LDIASSKVAT QQETPRDVTG NLNLDPPRKN CKNVQIPWQT 540 PPGDLSHIMK LRELITFTCC SFAIDVLELT VSINCLKEQL PGYGVDGAKI GLAMHCHMIY 600 LVLLEINISD SWHVGTGESS KEVEVQKNRA RREREVVYRR IQEIPPDPRE PWDGEMDFDD 660 LLTPEIPIEQ MPDVEPLEAP VESQEVAATV ASTSSQNVGG IGMPEPDLQL LAELLKNPQL 720 VFALTSGQGG QLSSGETVKL LDMIKANGVN SSSSLAALGT KADNKVEVSL PSPTPSSDPG 780 TGGLKPDFLR NPFSRQHAVT NGNAHTLPTT SLNYREIPAN LVLAPQSSAA VQQVVHQHQV 840 VPPVSSFQTA SQQWHLNLTS ANTKLASEMM INGNNLANST LGNAQPLPGS VMSTSTERQI 900 SYGPEPHHRE IARSNYYNAY TRGPLQASER NHLEQAPKFE TWSPENSPVR SHEYVVGPNQ 960 PQPIMNSRHG YRTERAMLQN PVQPSGYQDH GRGRNRGWHG GRR*

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MELPKEENQL AVATSSATSY HDLLHAQLGL FKSQIEHLKN IVTTQCELTG VNPLSQEMVI  60
FLRKKPRDLL NPKAIKYMQS VFALKDTISK KETREISSLF RITATQVRDF FNNKRSRVRK  120
FVTLSREKAN RSTACNEIHD EVLSTSNPNI PNEPVPIHSV VPMNIEEGPS SSVQDEVLSH  180
VDNSDRYFVE NIFSLMRKEE LFSGQVKLME WILQIQNPSV LNWFLTNGGV MILATWLSQA  240
ASEEQTSVLN VVLKVLCHLP LMKALPVHMS AILQGVNKLR FYRKSDISNR ARMLLARWSK  300
AFAKSQALKK RNGMNLAADA QDEMLLKQSI EEVLGDEARD SKVNDFVSYL RLLECFLNTL  360
NLQGNALIPF ENQHNLRKVK PSQPLKMITA STDDSNKRRG VLSILTEAQK RRKVQMVEQP  420
VQRTGIRSSP QVAKSVPATQ SRPLSADDIQ KAKIRAQFIQ NKYGKSITSP DESQKKIISS  480
QASPSVPNAF VRPKLEEQNK LDIASSKVAT QQETPRDVTG NLNLDPPRKN CKNVQIPWQT  540
PPGDLSHIMK LRELITFTCC SFAIDVLELT VSINCLKEQL PGYGVDGAKI GLAMHCHMIY  600
LVLLEINISD SWHVGTGESS KEVEVQKNRA RREREVVYRR IQEIPPDPRE PWDGEMDFDD  660
LLTPEIPIEQ MPDVEPLEAP VESQEVAATV ASTSSQNVGG IGMPEPDLQL LAELLKNPQL  720
VFALTSGQGG QLSSGETVKL LDMIKANGVN SSSSLAALGT KADNKVEVSL PSPTPSSDPG  780
TGGLKPDFLR NPFSRQHAVT NGNAHTLPTT SLNYREIPAN LVLAPQSSAA VQQVVHQHQV  840
VPPVSSFQTA SQQWHLNLTS ANTKLASEMM INGNNLANST LGNAQPLPGS VMSTSTERQI  900
SYGPEPHHRE IARSNYYNAY TRGPLQASER NHLEQAPKFE TWSPENSPVR SHEYVVGPNQ  960
PQPIMNSRHG YRTERAMLQN PVQPSGYQDH GRGRNRGWHG GRR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	397	413	KRRGVLSILTEAQKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-173	HB-other family protein