PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046749.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 227aa MW: 24505.7 Da PI: 9.9731

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046749.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cgk F + L H H Oeu046749.1 91 YECSVCGKAFGSYQALGGHKTIH 113 99********9988887776655 PP
2	zf-C2H2	11	0.0014	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k+F + L H r+H Oeu046749.1 143 HKCSICHKCFATGQALGGHKRRH 165 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MALEALNSPT TSWPLFQLDK AGLSSFRRWL KGKRSRRPQN VKQNEPTEEE HLAICLMMLA 60 REGGTTTTGK LLQKKSQSET RLPPDSTTVL YECSVCGKAF GSYQALGGHK TIHRKITGNG 120 GGRQEHPTTP ASATTTICGG RTHKCSICHK CFATGQALGG HKRRHYEGGA SGGAASSAMA 180 SSERVQSTVT HRDFDLNLPA LPQFWPGFGS GEDEVESPHP AKKFRL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-45	C2H2 family protein