PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046904.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRAS

Protein Properties

Length: 152aa MW: 17589.2 Da PI: 6.7754

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046904.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	89.2	6.6e-28	5	149	221	374
GRAS 221 eserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318 +++ ++v+ ++++l+P +vvv+e ea+hns s+++rf+ea+ +ysa fd+le + ++ r+++E n va eg+er+ r+ + Wr+ Oeu046904.1 5 PDCVENVMGAIRRLRPVLVVVIEVEANHNSLSLVDRFIEAFLFYSAYFDCLERS----NQYRMNLEGI------LNTVAIEGQERTTRNVKNDVWRAF 92 5566789*******************************************99....8999999865......9******************* PP GRAS 319 leeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +e++ + +++l+e+ qa+l+l+ + + ++e++ + +v gWk+ p+ s+++W+ Oeu046904.1 93 FERFRMIEIELNESSWYQANLVLNWFVyGSSCTLEHNGKGMVVGWKGTPIHSLTSWK 149 ********************9988899***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MVSRPDCVEN VMGAIRRLRP VLVVVIEVEA NHNSLSLVDR FIEAFLFYSA YFDCLERSNQ 60 YRMNLEGILN TVAIEGQERT TRNVKNDVWR AFFERFRMIE IELNESSWYQ ANLVLNWFVY 120 GSSCTLEHNG KGMVVGWKGT PIHSLTSWKF A*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03450.1	2e-19	GRAS family protein