PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047018.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 368aa MW: 39925.2 Da PI: 7.3946

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047018.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.8	1.3e-40	73	223	2	116
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.......... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa+++ tgt++++a+++ + s +ss+s+ s + Oeu047018.1 73 PPKRTTTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAVTGTGTIPANFTsLNISLRSSGSSISVPsqlrstyfds 170 789******************************************************************99986777777777444446667778888 PP TCP 89 ............................kaaksaakskksqksaasalnlak...esr.......a 116 + s++ + nl + e r + Oeu047018.1 171 nflttqrrgllpsiglssenppttmlnfQ-------------STSLNPNLLQakpEFRentlelmE 223 88888877777777765433333333331.............222222222210122222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEGGDDHLHR GRHNFPFQLF EKKEDEASSS TSNYPSLAIS DAAADTLNPS VTTPPPTASS 60 SHHVSNETSK KPPPKRTTTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE 120 WLLQQAEPAV IAVTGTGTIP ANFTSLNISL RSSGSSISVP SQLRSTYFDS NFLTTQRRGL 180 LPSIGLSSEN PPTTMLNFQS TSLNPNLLQA KPEFRENTLE LMETEESTGR KRRLEQELQQ 240 SQNQIGNYFL QSSTGSIPAN HASIPANFRQ PMAGSNNQVM NGDPIWTFPS ISNSSAAALY 300 RGTMSSGLHF MNFPTPVALW PSQQLGSSTG GGRGGPMEGQ LGMLTGPNQY RIGNNPDESE 360 SHVSESQ*

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEGGDDHLHR GRHNFPFQLF EKKEDEASSS TSNYPSLAIS DAAADTLNPS VTTPPPTASS  60
SHHVSNETSK KPPPKRTTTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE  120
WLLQQAEPAV IAVTGTGTIP ANFTSLNISL RSSGSSISVP SQLRSTYFDS NFLTTQRRGL  180
LPSIGLSSEN PPTTMLNFQS TSLNPNLLQA KPEFRENTLE LMETEESTGR KRRLEQELQQ  240
SQNQIGNYFL QSSTGSIPAN HASIPANFRQ PMAGSNNQVM NGDPIWTFPS ISNSSAAALY  300
RGTMSSGLHF MNFPTPVALW PSQQLGSSTG GGRGGPMEGQ LGMLTGPNQY RIGNNPDESE  360
SHVSESQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	7e-44	TCP family protein