PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047464.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 222aa MW: 24815.3 Da PI: 10.4591

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047464.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.1	7.4e-06	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu047464.1 71 FVCEICSKGFQRDQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	17.7	1e-05	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H++t+ Oeu047464.1 147 WKCEKCSKKYAVQSDWKAHQKTC 169 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MSNVTGEDGS FSSGEFQQVQ LQNQSQGADS ANGSSSRQPP SKKKRNLPGT PDPTADVIAL 60 SPKTLMATNR FVCEICSKGF QRDQNLQLHR RGHNLPWKLK QRTVESSRKR VYICPEPSCV 120 HHNPARALGD LTGIKKHYSR KHGEKKWKCE KCSKKYAVQS DWKAHQKTCG TREYKCDCGT 180 IFSRWQHCIG QFKSVSYLTF NAVKPPGILP GKLPRSKGLT L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	2e-79	C2H2 family protein