PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047564.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 164aa    MW: 18934.7 Da    PI: 10.2394
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047564.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.8e-05624119
                 EEETTTTEEESSHHHHHHH CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrH 19
                 ++C  C+k+F+r  nL+ H
  Oeu047564.1  6 FSCRLCSKTFNRFNNLQMH 24
                 89***************** PP
2zf-C2H215.74.2e-0590112123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C +C k+F  k + ++H +++
  Oeu047564.1  90 FVCRKCRKTFAVKGDWRTHEKNC 112
                  89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGPTQFSCRL CSKTFNRFNN LQMHTWAHGS QYRKGTESLR RAQPNAMLRL PCYCCAQGCE  60
YNIDHRRARP LKDFRTLQTH YKRKHGTKPF VCRKCRKTFA VKGDWRTHEK NCGKIWYCIC  120
GSDFKHKRSL RDHIKAFGLG HGATGIQTDF GDEGKSSSEI EIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.19e-93C2H2 family protein