PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047567.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 303aa MW: 34216.5 Da PI: 8.5451

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047567.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.5e-06	145	164	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ Oeu047567.1 145 FSCHLCSKTFNRFNNLQMHM 164 89*****************9 PP
2	zf-C2H2	13.6	0.0002	229	251	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C k+F k + ++H +++ Oeu047567.1 229 FICRKCRKTFAVKGDWRTHEKNC 251 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MTEPYYNFSG RWFDFIPPHS PYSSSSNTSY SHHADNLSHT VSQQIPTSPH PQEALPLLIN 60 LSPSKDEHQL SCSAIGNEGR SLGTASDESV TIDLNIGLPS PNSDLVTKIS SSGADIFSGL 120 PLNSINKGQY WIPTLTQILM GPTQFSCHLC SKTFNRFNNL QMHMWGHGSQ YRKGTESLRG 180 TQRSAMLRMP CYCCAHGCEY NIDHPRARPL KDFRTLQTHY KRKHGTKPFI CRKCRKTFAV 240 KGDWRTHEKN CGKIWYCICG SDFKHRRSLK DHIKAFGLSH GATRIQTDFE EEDESSSEIE 300 VK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-101	C2H2 family protein