PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047643.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 530aa MW: 60248.8 Da PI: 5.2291

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047643.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91	1.3e-28	55	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+++e+laL+e+r++m++++r++ lk+plW+evs+k+ e g++rs+k+Ckek+en+ k++k++keg+++r ++ +++++f+ le Oeu047643.1 55 RWPREETLALLEIRSDMDRAFRDAILKAPLWDEVSRKLGELGYNRSAKKCKEKFENIYKYHKRTKEGRSSR--QNGKNYRFFELLE 138 8*******************************************************************8..45567**9886 PP
2	trihelix	99.5	2.7e-31	354	438	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev aLi +r++++ +++++ k+plWee+s++m++ g+ rs+k+Ckekwen+nk+yk++k+++k+r +++s+tcpyf+ le Oeu047643.1 354 RWPKAEVEALIMLRTDLDLKYNDNGPKGPLWEEISSAMKKLGYDRSAKRCKEKWENINKYYKRVKDSKKRR-PQDSKTCPYFNLLE 438 8******************************************************************97.9********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MLDSSVFLEN SGVDGADGSG TSGGAASHGV AIEHRNEGGS GDGGEDIDRN SPGNRWPREE 60 TLALLEIRSD MDRAFRDAIL KAPLWDEVSR KLGELGYNRS AKKCKEKFEN IYKYHKRTKE 120 GRSSRQNGKN YRFFELLEVF DNQLSVQSTP LNQVQKYLTE TRATAPLRVN PLNASQGLRV 180 VPCSSQDPDT EFMPTSTSSS EERSEGIVER ERKLAEYFER LMKDVLKKQE DLQNKFLEAI 240 EKYEKDRIAR DEAWKVQEMA RIKREQDFLA QERAISAAKD AAVLAFLQKI SQHSTNLQIP 300 EIPFSAFGKH LETNDNVLEK RIDKQENGVG ETSNHTDKQE NSVGENTTLM SSSRWPKAEV 360 EALIMLRTDL DLKYNDNGPK GPLWEEISSA MKKLGYDRSA KRCKEKWENI NKYYKRVKDS 420 KKRRPQDSKT CPYFNLLESI YAKKSRTEHT SENLSYNMQP ESILLEMMGQ QKNQPPPLQP 480 PQQHHQSGAE DGESENQNQE DNAEDEEDDD NGDGYQIVTN IPFSLSTMG*

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MLDSSVFLEN SGVDGADGSG TSGGAASHGV AIEHRNEGGS GDGGEDIDRN SPGNRWPREE  60
TLALLEIRSD MDRAFRDAIL KAPLWDEVSR KLGELGYNRS AKKCKEKFEN IYKYHKRTKE  120
GRSSRQNGKN YRFFELLEVF DNQLSVQSTP LNQVQKYLTE TRATAPLRVN PLNASQGLRV  180
VPCSSQDPDT EFMPTSTSSS EERSEGIVER ERKLAEYFER LMKDVLKKQE DLQNKFLEAI  240
EKYEKDRIAR DEAWKVQEMA RIKREQDFLA QERAISAAKD AAVLAFLQKI SQHSTNLQIP  300
EIPFSAFGKH LETNDNVLEK RIDKQENGVG ETSNHTDKQE NSVGENTTLM SSSRWPKAEV  360
EALIMLRTDL DLKYNDNGPK GPLWEEISSA MKKLGYDRSA KRCKEKWENI NKYYKRVKDS  420
KKRRPQDSKT CPYFNLLESI YAKKSRTEHT SENLSYNMQP ESILLEMMGQ QKNQPPPLQP  480
PQQHHQSGAE DGESENQNQE DNAEDEEDDD NGDGYQIVTN IPFSLSTMG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-121	Trihelix family protein