PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047839.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NAC
Protein Properties Length: 248aa    MW: 28916.3 Da    PI: 6.718
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047839.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.14e-4151371128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                  l+pGfrF P +eelv++yL++k++g++ +++++vi++++iy++ PwdLp+    +++++ ++w+fF++r+++ a+g r+nr t++gyWkatg+   v+
  Oeu047839.1   5 LAPGFRFYPAEEELVSFYLRNKLQGTRvVDIDRVIPTLHIYDYSPWDLPQfageRCRGDLEQWFFFVPRQERVARGGRPNRLTEQGYWKATGSPCFVY 102
                  579***********************97888889***************646665566777************************************* PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  s++++ +g  kt+vfy gra++g+kt W m+ey+l
  Oeu047839.1 103 SSQDRIIGKNKTMVFYAGRARHGRKTVWKMNEYKL 137
                  *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDDQLAPGFR FYPAEEELVS FYLRNKLQGT RVVDIDRVIP TLHIYDYSPW DLPQFAGERC  60
RGDLEQWFFF VPRQERVARG GRPNRLTEQG YWKATGSPCF VYSSQDRIIG KNKTMVFYAG  120
RARHGRKTVW KMNEYKLIEF SESSSSTAAN PQLREEFSLC RVYRKTKGVR AFDRRPPPPD  180
EVVEGHQLVA AHHQNVVTTS QQNHPLADAT NHLFDNSSYH IANNWDMAVE ENEPCSWDWE  240
WFDFTNI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-74NAC family protein