PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047840.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NAC
Protein Properties Length: 252aa    MW: 29255.6 Da    PI: 5.9113
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047840.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1371.3e-4251371128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                  l+pGfrF Pt+eelv++yL++k++g++ +++++vi++++iy++ PwdLp+    ++++++++w+fF++r+++ a+g r+nr t++gyWkatg+   v+
  Oeu047840.1   5 LAPGFRFYPTEEELVSFYLRNKLQGTRvVDIDRVIPTLHIYDYSPWDLPQfageRCHGDQEQWFFFVPRQERVARGGRPNRLTEQGYWKATGSPCFVY 102
                  579***********************97888889***************656776667889************************************* PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  s++++++g k+++vfy gr+p+g+kt W m+ey++
  Oeu047840.1 103 SSRDRVIGKKRSMVFYAGRTPHGRKTVWKMNEYKV 137
                  *********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDDQLAPGFR FYPTEEELVS FYLRNKLQGT RVVDIDRVIP TLHIYDYSPW DLPQFAGERC  60
HGDQEQWFFF VPRQERVARG GRPNRLTEQG YWKATGSPCF VYSSRDRVIG KKRSMVFYAG  120
RTPHGRKTVW KMNEYKVLEF SEASYSNAAN PQLWEELSLC RVYRKTNSLR AFERRPPPPD  180
EVVEGHQLVA AHHQNVATTS QQNHPVADAT NYSFDNSLSE VLRIANDNCD MAVDENEPGS  240
WDLEWFDFTN F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.19e-69NAC family protein