PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047842.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NAC
Protein Properties Length: 257aa    MW: 29303.6 Da    PI: 5.662
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047842.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.43.3e-4161342128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  +pGfrF Pt++elv++yL++k++g++ le++ v+++++iy++ PwdLp + ++++ ++w+fF++r++k  +g r+nr t++gyWkatg+   v+s+++
  Oeu047842.1   6 APGFRFYPTEDELVSFYLHNKIRGTRlLEIDGVLPSINIYDYSPWDLPrELCRGDLEQWFFFVPRQEKVGRGGRPNRLTAQGYWKATGSPGFVYSSQD 103
                  79************************7788889***************555666777***************************************** PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  +++g k+++vfy gr p+g+kt W m+ey++
  Oeu047842.1 104 RVIGKKRSMVFYAGRVPHGRKTVWKMNEYKV 134
                  *****************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDDQVAPGFR FYPTEDELVS FYLHNKIRGT RLLEIDGVLP SINIYDYSPW DLPRELCRGD  60
LEQWFFFVPR QEKVGRGGRP NRLTAQGYWK ATGSPGFVYS SQDRVIGKKR SMVFYAGRVP  120
HGRKTVWKMN EYKVIELAEA SSSAANPQLG EDISLCRVYR KSESMRVFDR RPRPHEMAEG  180
NQLVAVHDQN VAATSQENHP PDRTVYLFDN SSPEDHDNAN PCQSVESAMN NCNMIVVDNG  240
PSWDGEQYNW SDFGNL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.23e-65NAC family protein