PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047878.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 607aa MW: 67673.1 Da PI: 5.7775

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047878.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.7e-14	432	477	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h +ErrRR+++N++f L++l+P +K++Ka+iL ++eY+k+L Oeu047878.1 432 NHVLAERRRREKLNERFIILKSLVPFV-----TKMDKASILGDTIEYVKQL 477 7999********************8.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MLQAAVQSVQ WTYSIFWQLS PQKGILLWSD GYYNGAIKTR KTIQPTEDSA EEASLQRSQQ 60 LIELYDSLSS GETNHQERRP SAALSPEDLT ESEWFYLICA SFSFPPGTGL PGKAYANQKH 120 IWLTGANEID SKVFSRAILA KTVLCIPVLD GIVELGTIEK VKEDVGFVQY IKSFFIDQYQ 180 HPHPQKPALS EHSTSNLAAS LAMLPIHTPI PPGNTSQMEE DSEAEFDSDT KEDYIDSHPR 240 DQNTDTVPQS DCAEQIMQLD MSEYIRVGSP DDGLNNMDSN FYLVPVAEPK RLKHHQCHGG 300 LYRAESVNRL TPLNDPLRNS LPPPHSVVHP QSDELSPEGI DYSQTVSTIL QHQSTIIQHQ 360 SSQWSESSST SSAFSNWSAT ANATPSSTHL DGGSQCLLKY ILFTVPFLHT KLTDATTSSF 420 RKGMPQEELN ANHVLAERRR REKLNERFII LKSLVPFVTK MDKASILGDT IEYVKQLSER 480 VQELEARTRE MEAEQRSRTV MDSAQSTRGG PGSYKRKMRI VEGSGGEGKS KAVHPTPRQV 540 AATAEVMVQV EVSIIENDAL VELHCPYKDG LLLDIMHTLR KLRIEIVGVQ SSVNNGIFHA 600 ELRAKV*

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MLQAAVQSVQ WTYSIFWQLS PQKGILLWSD GYYNGAIKTR KTIQPTEDSA EEASLQRSQQ  60
LIELYDSLSS GETNHQERRP SAALSPEDLT ESEWFYLICA SFSFPPGTGL PGKAYANQKH  120
IWLTGANEID SKVFSRAILA KTVLCIPVLD GIVELGTIEK VKEDVGFVQY IKSFFIDQYQ  180
HPHPQKPALS EHSTSNLAAS LAMLPIHTPI PPGNTSQMEE DSEAEFDSDT KEDYIDSHPR  240
DQNTDTVPQS DCAEQIMQLD MSEYIRVGSP DDGLNNMDSN FYLVPVAEPK RLKHHQCHGG  300
LYRAESVNRL TPLNDPLRNS LPPPHSVVHP QSDELSPEGI DYSQTVSTIL QHQSTIIQHQ  360
SSQWSESSST SSAFSNWSAT ANATPSSTHL DGGSQCLLKY ILFTVPFLHT KLTDATTSSF  420
RKGMPQEELN ANHVLAERRR REKLNERFII LKSLVPFVTK MDKASILGDT IEYVKQLSER  480
VQELEARTRE MEAEQRSRTV MDSAQSTRGG PGSYKRKMRI VEGSGGEGKS KAVHPTPRQV  540
AATAEVMVQV EVSIIENDAL VELHCPYKDG LLLDIMHTLR KLRIEIVGVQ SSVNNGIFHA  600
ELRAKV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	442	ERRRRE
2	438	443	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	1e-88	bHLH family protein