PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047960.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 28646.5 Da    PI: 9.3634
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047960.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.72e-30959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k ien++ rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss
  Oeu047960.3  9 KLIENTTSRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSQKGKLYEFSS 59
                 569**********************************************96 PP
2K-box57.56e-20124220998
        K-box   9 leeakaeslqqelakLkkeienLq.......reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                    e ++++++++ a L ++ie L+          R+llG++Le++sl+eL+++ +qLekslk iR++K +l++e+ie+l+ kek + een +L +k+
  Oeu047960.3 124 EVEGQMQHCEEDTATLAQKIELLEnskqlnfGCYRKLLGQNLETCSLQELHEIDSQLEKSLKIIRARKAQLFKEEIEKLKAKEKFMLEENAKLCEKV 220
                  4566799****************97655555557***********************************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MVRGKVEMKL IENTTSRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSQ KGKLYEFSSS  60
KELCKIIDGF CSSYFASPFV LNLQLDFYEI PYNRKRHNCK KQLMQKTIKR YLEHARRKQN  120
ISTEVEGQMQ HCEEDTATLA QKIELLENSK QLNFGCYRKL LGQNLETCSL QELHEIDSQL  180
EKSLKIIRAR KAQLFKEEIE KLKAKEKFML EENAKLCEKV NSQLPLFFWI FNIKELLLMH  240
FVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-53MIKC_MADS family protein