PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048400.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 281aa    MW: 31119 Da    PI: 7.7045
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048400.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.4e-18196230135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu048400.1 196 CLHCRADKTPQWRAGPMGPKTLCNACGVRYKSGRL 230
                  99*****************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MEILNPTEAS LMVEDDLLNF TLEGEEEELK PTFNLKGHFS SSQSTNPSTT ISRTETQNAS  60
LPEFVEEDLE WLSNMDAFPS VETCFGILSD NPELMLNRES PVSVLESSSS SINSNSNSNS  120
NGSTVASWCG SFKFPGNNLG RARSKRQRKR AGFGEFPSQQ CLWLNEIKVE KKKQESFSLQ  180
PSLVMIKNGA GMGRRCLHCR ADKTPQWRAG PMGPKTLCNA CGVRYKSGRL LPEYRPASSP  240
TFSNTLHSNS HRKVIEMRRQ KQIGPPDGIV ANETCEYKVG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.12e-40GATA family protein