PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu048420.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 290aa MW: 32244.8 Da PI: 6.7993

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu048420.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.8	1.9e-34	35	148	2	106
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsssg.. 88 +g+kdrhsk++T+ g+RdRRvRls ++a++f+d+qd+LG+d++sk+i+WL+++ak+ai++l +t ++s++ + +es+ Oeu048420.1 35 TGGKDRHSKVCTASGLRDRRVRLSPNTAIQFYDVQDRLGYDRPSKAIDWLMKEAKAAIDALDETplmrstvqeDQSPNLKIHQESN---------Yln 123 789*************************************************************6666544332222222222222.........133 PP TCP 89 .......kaaksaakskksqksaas 106 + + +++k++ +q+++++ Oeu048420.1 124 keddpicSLSFFSMKNHATQSPSTE 148 3334466333333333333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQESFSFNQA PSKSKVKGAK GEIIEVHGGR VVRSTGGKDR HSKVCTASGL RDRRVRLSPN 60 TAIQFYDVQD RLGYDRPSKA IDWLMKEAKA AIDALDETPL MRSTVQEDQS PNLKIHQESN 120 YLNKEDDPIC SLSFFSMKNH ATQSPSTEFQ AYTNDEFNSN LYPSYQQGFV PSINPSRLDT 180 NMEISKLQRI FAWNHASANS SNSRVGVAES FINSLQDLGQ NQIFSEREPL QSSINSPPVY 240 SPLRTPITAV GFAQDLSKIS TPFQEPEDKI PVSSKQSATS TTTFLHNES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-39	TCP family protein