PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048464.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family WOX
Protein Properties Length: 276aa    MW: 31062.1 Da    PI: 7.1262
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048464.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.12e-202889257
                 T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 ++R+t+t+eq+++L++l+++   r psae+++++++kl    +++ ++V++WFqN++a+e++
  Oeu048464.1 28 STRWTPTTEQIRILKDLYYNngVRSPSAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 89
                 58*****************8678*************************************97 PP
2Wus_type_Homeobox115.23.2e-372791265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt+eQi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
        Oeu048464.1 27 SSTRWTPTTEQIRILKDLYYnNGVRSPSAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 91
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
METQQNHQQQ GNEDGGNKSS NFLCRQSSTR WTPTTEQIRI LKDLYYNNGV RSPSAEQIQR  60
ISAKLRQYGK IEGKNVFYWF QNHKARERQK KRFTSTTPSA SDVPMHHRSP AAGVWKYHQD  120
HPFPNNLTAA GFPSSSSSSP GVLNIGPVGH PGYGSVAMEK SFRDCSISSS VDGNGSSLGQ  180
NFVRVGVDPY SSGGGYHPFL EKRKYVDYET LEDEQQEEEQ VPEIETLPLF PMHDEHTFKQ  240
ETNFYNGWHY GPRAEDNNIG SSRASLELTR LLNSP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-41WOX family protein