PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048577.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 334aa    MW: 38099.1 Da    PI: 6.1883
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048577.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH284e-09249287952
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 
                   rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k
  Oeu048577.1 249 ARRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVK 287
                  59******************97.....8**************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MESVEAFFEE ESWGSLSRML SSDQNPYFML HLLDHDSFSN HTNHVFSFEI PPDFVLNDEN  60
VASVFDESLL FSSDTTLITN LYHNSQESCN ELRPYEDNGD NLFHKGALTN WAMQKVSLQQ  120
QMILCSLRGN STLQKFRMIQ NGAEEDNSSE NPNKLPRRVS RDAPKNKRNE DSKSKNSKKL  180
IRNSNDREDT YNARGNGQSS SSCSIEDYSN SSRKSNEETS EPQGLATINS NGKRRASRGS  240
ATDPQNLYAR RRRERINERL RILQNLVPNG TKVDISTMLE EAVHYVKIFC FPSTKFSVLS  300
LQLLSSDDLW MFAPIAHYNG MDTDLHHKIS TYL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233253KRRASRGSATDPQNLYARRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.11e-25bHLH family protein