PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu048610.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NAC

Protein Properties

Length: 307aa MW: 34743.6 Da PI: 4.8543

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu048610.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	74.7	2.2e-23	13	113	36	128
NAM 36 evdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvm 123 e +i++++P++Lp vk++ ++++fF ++ ++ya+g+rk+r + +W++tgk+k+v++ +g+++g kk++v+y +++ +k++k++Wvm Oeu048610.1 13 EEGICYTHPENLP-GVKNDGSSVHFFYRTINAYASGRRKRRRihvqesaeKGHVRWHKTGKTKAVMQ-NGKQKGWKKIMVLYetSKKGSKPNKCKWVM 108 558********.7788899***************975677664333567********.999*******5534667778** PP NAM 124 heyrl 128 h+++l Oeu048610.1 109 HQFHL 113 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MFIDEFIPTL EGEEGICYTH PENLPGVKND GSSVHFFYRT INAYASGRRK RRRIHVQESA 60 EKGHVRWHKT GKTKAVMQNG KQKGWKKIMV LYETSKKGSK PNKCKWVMHQ FHLGTDEDER 120 EGEYVVSKIS YQPQKETDKN ETSLNLEESD IGTIHTSPKT PNTYIPFPPR PVETPDEESD 180 MGMIQSPLQE LVTFKELSHP SSYPQSNDQI DFTTSLAGES QAVDMDDPLL CNEIIDSYAH 240 LSDLKPKPSS YTQVAHNITN LPLGDGNGTF GAADLENLEL DTPPDFQLED LQFASQDSIF 300 DWLDRF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	74	RRKRRRIHVQESAEKGHVRWHKTGKTK
2	49	53	RKRRR
3	50	54	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	1e-55	NAC family protein