PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048734.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 265aa    MW: 30094 Da    PI: 4.3708
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048734.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.2e-193992356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 k++++t +q+e Le+ Fe ++++ + ++ +LAk+lgL+ rq+ +WFqNrRa++k
  Oeu048734.2 39 KKRRLTVDQVEFLERSFEAENTLEQGRKIQLAKELGLQPRQIGIWFQNRRARWK 92
                 56689************************************************9 PP
2HD-ZIP_I/II120.21.1e-3838128191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  ekkrrl+ +qv++LE+sFe+e++Le+ rK +la+eLglqprq+ +WFqnrRAR+ktkqlE dye+L  +y++lk++ ++L ke+e+L++e+
  Oeu048734.2  38 EKKRRLTVDQVEFLERSFEAENTLEQGRKIQLAKELGLQPRQIGIWFQNRRARWKTKQLEIDYETLEVSYNRLKTDYDNLLKENEKLKAEV 128
                  69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MVSFGGTGPY NSASLTVHPF DQEDNGYKYL DEYLNQPEKK RRLTVDQVEF LERSFEAENT  60
LEQGRKIQLA KELGLQPRQI GIWFQNRRAR WKTKQLEIDY ETLEVSYNRL KTDYDNLLKE  120
NEKLKAEVLV LVDNILVRDQ GDGNSPSSDN QKLPEGSRKE AISDTISEDE ESKVSMVALR  180
SEDLSSARSD EIDGPHIADA IHSSHSFKPD RSDLSQSEDN WNEELLRPAF TSSGIGDTDY  240
PGVSTNSCYF GFPVEDQAFG FWSY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18795RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-40HD-ZIP family protein