PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048888.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 246aa    MW: 25453.9 Da    PI: 6.7964
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048888.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.84.5e-06139161123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C+ Cgk F +   L  H+r H
  Oeu048888.1 139 FQCSVCGKQFQSAKALFGHMRQH 161
                  89*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRTGHSAFR AYRAQAPQDP DQSSPQRGSG SYISSPMQRP PMAPLPLPLP HVMGRPGHSA  60
FRSYRPQSQP GGGGSSGGAA GASGNVSGSG LFGVQAIPVG GSGGGGGYAA GGVRIGNPMI  120
RKRVREGNQG GRGDGGNPFQ CSVCGKQFQS AKALFGHMRQ HPDRGWKGAF PPPTFRAEEE  180
FADFPGHLNP GRAAADVEQE AQAGEEAMEV QEGREEEGDG ATGLQKYKLP DLNYEPPQDD  240
DDAAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.19e-14C2H2 family protein