PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049019.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 666aa MW: 74777.5 Da PI: 6.9661

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049019.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.8	5.7e-25	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+kvlt sd++++g +++ +k+a+e+ ++++ +++l+ +d++g +W +k+i+r++++r++lt+GW+ Fv++++L +gD++vF + +++el+ Oeu049019.1 132 FCKVLTASDTSTHGGFSVLRKHANEClpsldMSQQMPTQELVAKDLHGIEWHFKHIFRGQPRRHLLTTGWSTFVNSKRLTAGDSFVFL--RGEKGELH 227 99**************************9444445569********************************************..4499 PP EEEE-S CS B3 94 vkvfrk 99 v+v+r+ Oeu049019.1 228 VGVRRH 233 **98 PP
2	Auxin_resp	97.7	1.6e-32	258	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+++F v+Y+Pr+ s+F++ ++k+++a+++ + vG+Rfkm+fe+edsserr+sGt++gv++++p +W++S WrsLk Oeu049019.1 258 ASHAIATRTIFVVYYKPRT--SQFIIGLKKYLDAVNHGFEVGSRFKMRFEGEDSSERRFSGTIIGVENFSP-HWKDSVWRSLK 337 789*************6..9*********************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MATRRSFSQQ QQHMGSFAEG CGSEYVLYTE LWKACAGPLV DVPKIKERVY YFPQGRMEQL 60 EASTNEELNQ KITTFNLPSK ILCSVFNIEL LAEKDTDEVY AQITLMPETD QTEPRSPDEC 120 YPETPGPTVH SFCKVLTASD TSTHGGFSVL RKHANECLPS LDMSQQMPTQ ELVAKDLHGI 180 EWHFKHIFRG QPRRHLLTTG WSTFVNSKRL TAGDSFVFLR GEKGELHVGV RRHTHYQSSM 240 PSSLISSQSM QLGVLATASH AIATRTIFVV YYKPRTSQFI IGLKKYLDAV NHGFEVGSRF 300 KMRFEGEDSS ERRFSGTIIG VENFSPHWKD SVWRSLKVQW DETASIRRPE RVSPWEIEPV 360 VVSVPTSLVQ SVATKHKRFR SHVENPVPET PTSTAPAAWN PSHDSHEVNY ALEEQRNVHK 420 KNCGNHNLNT SVNVFAEDTE KSKSASAWSL FSDHLATHSG KQSNGPMPFL NDRRESHNVA 480 TCRLFGVDLI SPSVGFLDEN STIKPVDISS DACEGYVSSK LSSGDSEQKS CPSKDSKESM 540 QEKLQVLTKE VQRRENHISR SCTKVHMQGV TLGYAVDLTA LKGYGELISE LEEMFGIKGE 600 LWPRKKWEII FTDDEGDVML MGDDPWPEFC GMARMIFICS CQDVKKMQSG SKLPLCSAAK 660 GGRLT*

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MATRRSFSQQ QQHMGSFAEG CGSEYVLYTE LWKACAGPLV DVPKIKERVY YFPQGRMEQL  60
EASTNEELNQ KITTFNLPSK ILCSVFNIEL LAEKDTDEVY AQITLMPETD QTEPRSPDEC  120
YPETPGPTVH SFCKVLTASD TSTHGGFSVL RKHANECLPS LDMSQQMPTQ ELVAKDLHGI  180
EWHFKHIFRG QPRRHLLTTG WSTFVNSKRL TAGDSFVFLR GEKGELHVGV RRHTHYQSSM  240
PSSLISSQSM QLGVLATASH AIATRTIFVV YYKPRTSQFI IGLKKYLDAV NHGFEVGSRF  300
KMRFEGEDSS ERRFSGTIIG VENFSPHWKD SVWRSLKVQW DETASIRRPE RVSPWEIEPV  360
VVSVPTSLVQ SVATKHKRFR SHVENPVPET PTSTAPAAWN PSHDSHEVNY ALEEQRNVHK  420
KNCGNHNLNT SVNVFAEDTE KSKSASAWSL FSDHLATHSG KQSNGPMPFL NDRRESHNVA  480
TCRLFGVDLI SPSVGFLDEN STIKPVDISS DACEGYVSSK LSSGDSEQKS CPSKDSKESM  540
QEKLQVLTKE VQRRENHISR SCTKVHMQGV TLGYAVDLTA LKGYGELISE LEEMFGIKGE  600
LWPRKKWEII FTDDEGDVML MGDDPWPEFC GMARMIFICS CQDVKKMQSG SKLPLCSAAK  660
GGRLT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein