PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049100.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 322aa    MW: 35172.8 Da    PI: 5.2527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049100.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.2e-11103154155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r +h  +Er+RR+++N+ +  Lr+l P+    + k+ + a+i   + +YI +Lq
  Oeu049100.1 103 QRISHITVERNRRKQMNEHLIVLRSLTPSF---YVKRADQASIIGGVADYITELQ 154
                  699**************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDGENLFDFF EDSEFGTEST IGGVGVNPAS PDDIFSILEA LDGVSGFNLE TVPVNEVGLL  60
VSQKSNASSV VQESETEFEA SQKCKKQKVI ATASTEAAVD GQQRISHITV ERNRRKQMNE  120
HLIVLRSLTP SFYVKRADQA SIIGGVADYI TELQQVLKSL EAKKQRKAYT EVLSPRLVSS  180
PRPSPLSPRK PPLSPILNLP LSPRTPQPYS PYKTWLHSPT NSSNSSINDS VNELVANSKS  240
EIADVEVKFS CPNVLLKTVS PKIQGQTAKI ISALEELSLE ILHVNVSTVG DRMRNSFTIK  300
IGIECQLSAE DLAQQIQQTF C*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.12e-40bHLH family protein