PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049552.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 115aa    MW: 12636.7 Da    PI: 10.2092
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049552.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC110.21.1e-34181001899
        NF-YC  18 nhelPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                   h+lPlarikki+k   ++vkmis eaP+++skacelfi elt r+w+ + ++k+rtl+k d+a+av +tdifdflv+ v ++
  Oeu049552.1  18 PHSLPLARIKKIMKNsSDEVKMISGEAPIVFSKACELFIEELTKRAWMTTVQAKKRTLHKEDVASAVINTDIFDFLVNLVSEN 100
                  599***********72578***********************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MRQRGAYSGL RISGKTGPHS LPLARIKKIM KNSSDEVKMI SGEAPIVFSK ACELFIEELT  60
KRAWMTTVQA KKRTLHKEDV ASAVINTDIF DFLVNLVSEN SGKSSEDPQP VMKA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.27e-33NF-YC family protein