PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049604.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 464aa MW: 50446.8 Da PI: 5.5967

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049604.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.7	9.8e-24	139	182	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrC+RtDGKkWRCs++v +++k+CErHlhrgr rsrk++e Oeu049604.1 139 DSEPGRCKRTDGKKWRCSKDVAPNQKYCERHLHRGRPRSRKPVE 182 689**************************************998 PP
2	QLQ	58.8	1.6e-20	78	112	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT +Q+ +Lk+Q+++yKy++a++PvPp+Ll++i+ Oeu049604.1 78 PFTSEQWKELKRQAMIYKYMVASVPVPPDLLFPIS 112 8********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MTSNLNQKNH DRQHDYGRGT LSNHGGGNEI GENIYVDDVR SSGGGGSVAV KTLQLFDIIP 60 SSTDLKSPGG MEANVGFPFT SEQWKELKRQ AMIYKYMVAS VPVPPDLLFP ISSHYPAVAP 120 DPSLNSGGIF NMRNSKNGDS EPGRCKRTDG KKWRCSKDVA PNQKYCERHL HRGRPRSRKP 180 VEVKNNGSFN TNPQATIAAS NQFLASNETS LLYYPKTDVN ISTASCKKHN SRDLDLMIEA 240 EMVAMRVANP QWQHLMNTDI ANEGSIYNTN ASVFYQDYAG NQSLNVFSYA DYPASDLVVD 300 ETTREFNDAW SNNNGNADSS VSSNQGTFSP SSLTLTMAMA AGDILDEQME KIETGSGIGD 360 FDDHKHEDSS WLDPISSMRF AQGGPLAEAL LPRSTTLKGS NSASPYYSIS PSATTVSSPS 420 GVLNRTLFSH SDGSVCNSPT LVAPPGLSEA VALPWLNWAY ELL*

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MTSNLNQKNH DRQHDYGRGT LSNHGGGNEI GENIYVDDVR SSGGGGSVAV KTLQLFDIIP  60
SSTDLKSPGG MEANVGFPFT SEQWKELKRQ AMIYKYMVAS VPVPPDLLFP ISSHYPAVAP  120
DPSLNSGGIF NMRNSKNGDS EPGRCKRTDG KKWRCSKDVA PNQKYCERHL HRGRPRSRKP  180
VEVKNNGSFN TNPQATIAAS NQFLASNETS LLYYPKTDVN ISTASCKKHN SRDLDLMIEA  240
EMVAMRVANP QWQHLMNTDI ANEGSIYNTN ASVFYQDYAG NQSLNVFSYA DYPASDLVVD  300
ETTREFNDAW SNNNGNADSS VSSNQGTFSP SSLTLTMAMA AGDILDEQME KIETGSGIGD  360
FDDHKHEDSS WLDPISSMRF AQGGPLAEAL LPRSTTLKGS NSASPYYSIS PSATTVSSPS  420
GVLNRTLFSH SDGSVCNSPT LVAPPGLSEA VALPWLNWAY ELL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	7e-39	GRF family protein