PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049819.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 325aa MW: 34618.2 Da PI: 9.487

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049819.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.2	8.5e-40	74	201	5	112
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 k++++++hTkv+gR+RR+R++++caar+F+L++eLG+++d++ti WLlqqa+pai+++tgt++++a+++ + s +ss+s+ s++ Oeu049819.1 74 KSTTKDRHTKVDGRGRRIRMPVTCAARVFQLTRELGHKSDGETIKWLLQQAEPAIIAATGTGTIPANFSsLNLSLRSSGSTLSAPpsisaphsfhgal 171 789***************************************************************99988888888888666667777887777788 PP TCP 89 ......kaaksaakskksqksaasalnlak 112 + +s++ s + q+++ + l+ a+ Oeu049819.1 172 glthrpYEDNSSHLSGFHQHQTPNLLQAAQ 201 888777666666666666666665555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEVTDSNTNE QAAPQVQPPH GGRDCSSSSP ASAAVLINTS TAQPPPTAQF VESSLAIVTT 60 RSETNDDSTK KRPKSTTKDR HTKVDGRGRR IRMPVTCAAR VFQLTRELGH KSDGETIKWL 120 LQQAEPAIIA ATGTGTIPAN FSSLNLSLRS SGSTLSAPPS ISAPHSFHGA LGLTHRPYED 180 NSSHLSGFHQ HQTPNLLQAA QITNTLGDGG SGGGGAFVRQ GTTENYFEKR YREDLFKEQR 240 TNNSQGEGSS SPSNRKLKSY DMQTSSLRHS NMLPTTAMWA VAPEPSTTAT SSTFWMLPVT 300 ASGSGGNVQT LAGATTTFTA SWIW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-55	TCP family protein