PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049875.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 166aa MW: 19347.6 Da PI: 10.949

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049875.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.4	7.7e-19	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v q+G g+W+ +ar g++R +k+c++rw +yl Oeu049875.1 13 KGPWTPEEDKLLTQCVSQYGDGRWSFVARSSGLNRNGKSCRLRWVNYL 60 79********************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ Oeu049875.1 66 RGHITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 110 6778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MSGRGVSEQC WTKGPWTPEE DKLLTQCVSQ YGDGRWSFVA RSSGLNRNGK SCRLRWVNYL 60 RPGLKRGHIT PQEEGIIIEL HALWGNKWST IARYLPGRTD NEIKNYWRTH FKKTGKPFKS 120 KKRRKNLAKS NIFWKKEMVE IKTLLCKQIP LVMTIYLIHK ASKKQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	125	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	2e-58	MYB family protein