PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049879.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 339aa    MW: 38475 Da    PI: 6.3252
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049879.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-114999255
                 HHHHHHHHHHHHHHHHHH.HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  2 rrahnerErrRRdriNsa.feeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 r +h+e E+rRR++iN++ f+ LrellP++    ++K +Ka+ L ++++Y + Lq
  Oeu049879.1 49 RSKHSETEQRRRSKINERqFQILRELLPEN----DQKRDKATLLLEVIRYTRFLQ 99
                 899*************9758*********9....9***************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MKERPIALQQ EVRVRVRLSV CIVVIVFEVL NWAGKEERKR DDQKVNALRS KHSETEQRRR  60
SKINERQFQI LRELLPENDQ KRDKATLLLE VIRYTRFLQE RLQMYEGTYE GWSPEPTKLM  120
PWRSNSGPVE SLIDQSQLVR NRTDHEDNYI VNPTMLNHAQ NSVESDVSRD ILHKPTENPH  180
VAANDTIHLN IPRQSNLLEG VSCQPSQVSF LDAEQMTPQL QSQFWVGKSC ANESSVPIYI  240
PNEVEEQKSE SGEASISRTY SQGLLDTLTN ALQSSGVDLS QASISVQLDV CKRANSSSTA  300
TMFSLKDHEN PSGVSSANFG DTGENYVHPR KRLRAETS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-51bHLH family protein