PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049936.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 253aa    MW: 27830.4 Da    PI: 9.2935
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049936.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.52.7e-3245100359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  k+ Y+eClkNhAas+Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e++ 
  Oeu049936.1  45 KISYRECLKNHAASIGGNVTDGCGEFMPS-GEEGTLEALKCAACNCHRNFHRKEHHR 100
                  789*************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MALSGEHKDM RMQGSTGYNS VEIQPEKTRT LEPNSGGSKL KTPTKISYRE CLKNHAASIG  60
GNVTDGCGEF MPSGEEGTLE ALKCAACNCH RNFHRKEHHR EATAAGMIHP LPFPPPLPSP  120
SITQHRMGAH NINHWSSMAQ PVKMAFGSGG GGGSVGTDSS TEELNFNGYQ SNAAAAPPPP  180
QFVNKKRFRT KFTSEQKDKM LEFAERLGWK IPREDDTEVQ RFCAEVGVKR QVFKVWMHNN  240
KSSSAKKNLQ EF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-58ZF-HD family protein