PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049940.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 96aa    MW: 10688 Da    PI: 8.8668
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049940.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-09653347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                      WT+   +l+ +a + + ++   +W + a+ +g g+t++++k+++ k+
      Oeu049940.1  6 TWTAKQNKLFENALATYDKDspdRWQKMANAVGGGKTAEDVKLHYEKL 53
                     7********************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASNSTWTAK QNKLFENALA TYDKDSPDRW QKMANAVGGG KTAEDVKLHY EKLVEDINHI  60
ESGQIPLPNY SSTGDTSKGN KIMAEEKRLK YLKLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.16e-36MYB_related family protein