PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050108.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 237aa    MW: 26251.2 Da    PI: 6.2782
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050108.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1771.8e-5565160297
        NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                  +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcq ekrktingdd+lwa+ tlGfedyv+plk+yl+kyre+eg+k
  Oeu050108.1  65 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQSEKRKTINGDDILWAIMTLGFEDYVNPLKLYLAKYREVEGDK 160
                  89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MKREGDNIDD ERSAFGPNGT KRISQETICS KDANIATSSS NVNPNNVGAY GTSIGNGTNG  60
NNNNKEQDRF LPIANVGRIM KKVIPGNGKI SKDAKETVQE CVSEFISFVT GEASDKCQSE  120
KRKTINGDDI LWAIMTLGFE DYVNPLKLYL AKYREVEGDK LNVPKQQRVE QRLQQHEQQQ  180
KPNVPYNPST VYSSTNLICQ PPFVSTDPPF PLPISQNSIQ NSPLPQQEHI DSVGHW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.13e-63NF-YB family protein