PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050185.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 57aa    MW: 6484.65 Da    PI: 6.3623
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050185.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF29.97.3e-1011342750
                 HHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF 27 LSvLCdaevaviifsstgklyeys 50
                 LSvLCd++ +v+i++++gk+ +++
  Oeu050185.1 11 LSVLCDVKDCVVILGPDGKIETWP 34
                 9**********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    
MELSVLCDVK LSVLCDVKDC VVILGPDGKI ETWPQNRIYV REMVDLYRKN CLNNNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11250.16e-10M-type_MADS family protein